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陈伟教授

    
 
 
 

      陈伟,博士、创新研究院教授、博士生导师。现任中国计算机学会生物信息学专委会委员、中国人工智能学会生物信息学专委会委员、中国生物工程学会生物信息学专委会委员,四川省生物信息学会理事,Molecular Therapy-Nucleic Acids副主编,Current Bioinformatics 和Current Medicinal Chemistry期刊专栏编辑(Section Editor),Scientific Reports编委。

      主要从事生物信息学,癌症基因组学,网络药理学研究;先后主持国家和省部级基金项目10余项;在计算表观遗传学,基因组功能元件挖掘,DNA/RNA修饰和生物信息学算法开发等方面取得了创新性的研究成果,建立了40余个生物信息学网站,为来自多个国家和地区的科研人员提供了免费计算、分析服务,在Nucleic Acids Research、Briefings in Bioinformatics、Bioinformatics等期刊发表学术论文120余篇。先后获 “科睿唯安全球高被引科学家”,四川省特聘专家等奖励和荣誉称号。

 
 

1.Hui Yang, Wuritu Yang, Fuying Dao, Hao Lv, Hui Ding*, Wei Chen*, Hao Lin*. (2020) A comparison and assessment of computational method for identifying recombination hotspots in Saccharomyces cerevisiae. Briefings in Bioinformatics, In Press.

2.Fulei Nie, Pengmian Feng, Xiaoming Song, Meng Wu, Qiang Tang, Wei Chen. (2020) RNAWRE: a resource of writers, readers and erasers of RNA modifications. Database, In Press.

3.Qiang Tang, Juanjuan Kang, Jiaqing Yuan, Hua Tang, Xinahai Li, Hao Lin*, Jian Huang*, Wei Chen*. (2020) DNA4mC-LIP: a linear integration method to identify N4-methylcytosine site in multiple species. Bioinformatics, 36(11):3327-3335.

4.Kewei Liu,Wei Chen*. (2020) iMRM: a platform for simultaneously identifying multiple kinds of RNA modifications. Bioinformatics, 36(11):3336-3342.

5.Jun Wang, Pufeng Du*, Xinyu Xue, Guangping Li, Yuanke Zhou, Wei Zhao, Hao Lin, Wei Chen*. (2020) VisFeature: a stand-alone program for visualizing and analyzing statistical features of biological sequences. Bioinformatics, 36(4):1277-1278.

6.Wei Chen*, Hao Lv, Fulei Nie, Hao Lin*. (2019) i6mA-Pred:Identifying DNA N6-methyladenine sites in the rice genome. Bioinformatics, 35(16):2796-2800.

7.Wei Chen*, Pengmian Feng, Xiaoming Song, Hao Lv, Hao Lin*. (2019) iRNA-m7G: identifying N7-methylguanosine sites by fusing multiple features. Molecular Tehrapy-Nucleic Acids, 18:269-274.

8.Wei Chen*, Pengmian Feng, Hui Yang, Hui Ding, Hao Lin*, Kuochen Chou*. (2018) iRNA-3typeA: identifying 3-types of modification at RNA’s adenosine sites. Molecular Therapy-Nucleic Acids, 11: 468-474.

9.Wei Chen*, Hui Yang, Pengmian Feng, Hui Ding, Hao Lin*, (2017) iDNA4mC: identifying DNA N4methylcytosine sites based on nucleotide chemical properties. Bioinformatics, 33(22): 3518-3523.

10.Wei Chen*, Hua Tang, Jing Ye, Hao Lin*, Kuochen Chou*. (2016) iRNA-PseU: Identifying RNA pseudouridine sites. Molecular Therapy - Nucleic Acids, 5: e332.

11.Wei Chen*, Xitong Zhang, Jordan Brooker, Hao Lin, Liqing Zhang*, Kuo-Chen Chou*. PseKNC-General: A cross-platform package for generating various modes of pseudo nucleotide compositions. Bioinformatics: 2015, 31(1), 119-120.

12.Hao Lin*, Enze Deng, Hui Ding, Wei Chen*, Kuochen Chou*. (2014) iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide composition. Nucleic Acids Research, 42(21): 12961-12972.

13.Shohui Guo, Enze Deng, Liqin Xu, Hui Ding, Hao Lin*, Wei Chen*, Kuochen Chou*. (2014) iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition. Bioinformatics, 30(11): 1522-1529. 

14.Wei Chen*, Pengmian Feng, Hao Lin*, Kuo-Chen Chou*. (2013) iRSpot-PseDNC: Identify recombination spots with pseudo dinucleotide composition. Nucleic Acids Research, 41(6): e68.

15.Wei Chen, Liaofu Luo*, Lirong Zhang. (2010) The organization of nucleosomes around splice sites. Nucleic acids research, 38(9):2788-2798.

    
 

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